> nbt.data=read.table("a.txt",sep=",& quot;,header=TRUE,row.names=1)
> nbt.data=log(nbt.data+1)
Hi_2338_1 Hi_2338_2 Hi_2338_3 Hi_2338_4 Hi_2338_5
A1BG 2.310553 0.00000000 0.000000 1.0116009 0
A1BG-AS1 0.000000 0.00000000 1.497388 0.3074847 0
A1CF 0.000000 0.04879016 0.000000 0.0000000 0
A2LD1 0.000000 0.00000000 0.000000 0.2546422 0
A2M 0.000000 0.00000000 0.000000 0.0000000 0
> nbt=new("seurat",raw.data=nbt.data)
> nbt=setup(nbt,project="NBT",min.cells = 3,names.field = 2,names.delim = "_",min.genes = 1000,is.expr=1,)
Error in setup(nbt, project = "NBT", min.cells = 3, names.field = 2, names.delim = "_", :
could not find function "setup"